Deciphering the molecular and functional basis of TMexCD1: the plasmid-encoded efflux pump of resistance-nodulation-division superfamily.

Horizontal gene transfer has been demonstrated to be an important driver for the emergency of multidrug-resistant pathogens. Recently, a transferable gene cluster tmexCD1-toprJ1 of the resistance-nodulation-division (RND) superfamily was identified in the plasmids of animal-derived Klebsiella pneumoniae strains, with a higher efflux capacity for various drugs than the Escherichia coli AcrAB-TolC homolog system. In this study, we focused on the differences in the inner membrane pump of these two systems and identified some key residues that contribute to the robust efflux activity of the TMexCD1 system. With the aid of homologous modeling and molecular docking, eight residues from the proximal binding pocket (PBP) and nine from the distal binding pocket (DBP) were selected and subjected to site-directed mutagenesis. Several of them, such as S134, I139, D181, and A290, were shown to be important for substrate binding in the DBP region, and all residues in PBP and DBP showed certain substrate preferences. Apart from the conservative switch loop (L613-623TMexD1) previously identified in the E. coli AcrB (EcAcrB), a relatively unconservative loop (L665-675TMexD1) at the bottom of PBP was proposed as a critical element for the robust activity of TMexD1, due to variations at sites E669, G670, N673, and S674 compared to EcAcrAB, and the significantly altered efflux activity due to their mutations. The conservation and flexibility of these key factors can contribute to the evolution of the RND efflux pumps and thus serve as potential targets for developing inhibitors to block the widespread of the TMexCD1 system.

Nonsense-mediated mRNA decay promote C2C12 cell proliferation by targeting PIK3R5.

Nonsense mediated mRNA decay (NMD) is a highly conserved RNA quality control system, which can specifically clear abnormal mRNA and play an important role in tumorigenesis. Myoblast proliferation plays an important role in the repair of skeletal muscle injury and the development of myosarcoma, and is controlled by a variety of transcription factors and signals. The molecular mechanism by which NMD regulates the proliferation of myoblast cells is not completely clear. In this study, we found that the NMD activity of skeletal muscle is high in 1-week-old mice but decreases gradually with age, corresponding to a weakening capacity for muscle growth and regeneration. Here, we provide evidence that NMD plays an important role in myoblast proliferation and apoptosis. In addition, we found that PIK3R5 is an NMD substrate gene which can inhibit AKT activity and C2C12 cell proliferation. Therefore, NMD can target PIK3R5 to enhance AKT activity, which in turn promotes C2C12 cell proliferation. This study provides new insights into NMD regulatory mechanisms in muscular development and into potential novel therapeutic strategies for muscle atrophy.

Distribution and Interactive Effects of Heavy Metals in Soil-Maize (Zea Mays L.) System in the Mercury Mining Area, Southwestern China.

The concentrations and interactive effects of beneficial elements (i.e., Se, Mo, and Zn) and heavy metals (As, Cd, Hg, and Pb) of maize (Zea mays L.) grown on lime soil and/or soil with mercury tailing were investigated in this study. The results show that the concentrations of heavy metals (i.e., As, Hg, and Pb) in soil with tailing were higher than those in lime soil. The concentrations of beneficial elements (i.e., Mo and Zn) in maize grown on soil with tailing were higher than those of maize grown on lime soil. The mean concentrations of Se, Mo, and Zn in maize grown on soil with tailing were 3.67 mg/kg, 0.530 mg/kg, and 27.4 mg/kg. The pH and an antagonistic effect played an important role in the concentrations of Mo and Zn in maize. The Se concentration in maize was controlled by the planting media.

Potentially toxic metal(loid) distribution and migration in the bottom weathering profile of indigenous zinc smelting slag pile in clastic rock region.

BACKGROUND: There are contaminated by potentially toxic metal(loid)s (PTMs) that the surface soil and the weathering profiles around the indigenous zinc smelting slag piles or smelters in the smelting area. However, few systematic studies are currently focusing on the PTM distribution and migration among the slag and its bottom weathering profile. METHODS: This research determined the concentrations of PTMs and pH values. And we analyzed PTM distribution in the two weathering profiles (slag-covered and slag-absent) with a small horizontal distance in the clastic rock region in the smelting area. RESULTS: The soil As and Pb contents, respectively, within the 30 and 50 cm depth in the slag-covered section were higher than those in the slag-absent profile. All soil Cd and Zn contents of the slag-covered core were significantly higher than those in the slag-absent weathering section. CONCLUSIONS: Compared with the slag-absent weathering section, some PTMs (i.e., As, Cd, Pb and Zn) in the bottom weathering profile were polluted by these elements in the covered slag in the clastic rock region, and their depths were influenced by the slag to varying degrees. Additionally, with time, some PTMs (especially Cd and Zn) of the slag might finally contaminate the groundwater by leaching and infiltration through its bottom weathering profile in the clastic rock region.

Distribution, accumulation, and potential risks of heavy metals in soil and tea leaves from geologically different plantations.

Risk assessment regarding heavy metals in tea is crucial to ensure the health of tea customers. However, the effects of geological difference on distribution of heavy metals in soils and their accumulation in tea leaves remain unclear. This study aimed to estimate the impacts of geological difference on distribution of cadmium (Cd), lead (Pb), thallium (Tl), mercury (Hg), arsenic (As), antimony (Sb), chromium (Cr), nickel (Ni), and manganese (Mn) in soils and their accumulation in tea leaves, and further evaluate their health risks. 22 soils and corresponding young tea leaves (YTL) and old tea leaves (OTL), from geologically different plantations, were sampled and analyzed. Results showed that heavy metals concentrations in soils, derived from Permian limestone and Cambrian weakly mineralized dolomite, were obviously greater than those from Silurian clastic rock. The geological difference controlled the distribution of soil heavy metals to a large extent. Contents of Cd, Tl, and Mn in tea leaves mainly depended on their contents in soils. Soil Hg, Pb, As, and Sb contents may not be the only influencing factors for their respective accumulation in tea leaves. More attentions should be paid to soil acidification of tea plantations to ensure the tea quality security. Target hazard quotients (THQ) of Cd, Pb, Tl, Hg, As, Sb, Cr, and Ni and hazard index (HI) via tea intake were below one, indicating no human health risk. The non-mineralized Silurian area was less at risk of heavy metals accumulation in tea leaves than the Cambrian metallogenic belt and the Permian Cd-enriched zone. This study could provide an important basis to understand and mitigate the potential risks of heavy metals in tea.

Use of mineral multi-elemental analysis to authenticate geographical origin of different cultivars of tea in Guizhou, China.

BACKGROUND: The geographical origin of tea (Camellia sinensis) can be traced using mineral elements in its leaves as fingerprints. However, the role that could be played by soil mineral elements in the geographical authentication of tea leaves has been unclear. In this study, 22 mineral elements in 73 pairs of tea leaves and soils from three regions (Pu'an, Duyun, and Liping) in Guizhou, China, were determined using inductively coupled plasma mass spectrometry (ICP-MS) and inductively coupled plasma atomic emission spectrometry (ICP-AES). The mineral element concentrations were processed by multivariate statistical analysis, including one-way analysis of variance (ANOVA), correlation analysis, principal component analysis (PCA), and stepwise linear discriminant analysis (S-LDA). RESULTS: Based on a one-way ANOVA, tea leaves and soils with different origins possessed unique mineral element fingerprints. Sixteen mineral element concentrations in tea leaves were significantly correlated with those in soils (P < 0.05). The geographical origins of tea leaves were effectively differentiated using the 16 correlated mineral elements combined with PCA. The S-LDA model offered a 100% differentiation rate, and six indicative elements (phosphorus, Sr, U, Pb, Cd, and Cr) were selected as important fingerprinting markers for the geographic traceability of tea leaves. The accurate discrimination rate of geographical origin was unaffected by the cultivars of tea in the S-LDA model. CONCLUSIONS: Mineral elements in soils played an important role in the geographical authentication of tea leaves. Mineral elemental concentrations with significant correlations between tea leaves and soils could be robust, and could be used to trace the geographical origins of tea leaves. © 2020 Society of Chemical Industry.

Geographical origin discrimination of pepper (Capsicum annuum L.) based on multi-elemental concentrations combined with chemometrics.

The concentrations of twenty-four elements in twenty-five peppers from three cultivated regions in Guizhou Province (China) were analyzed. The chemometric data processing, including one-way analysis of variance, principal component analysis, linear discriminant analysis (LDA), and orthogonal partial least squares discriminant analysis (OPLS-DA) were executed to differentiate the peppers. Consequently, the contents of 16 elements (Arsenic, Ba, Cu, Co, Cr, Ni, Pb, Sn, Sb, Mo, Sr, Y, Zn, Ca, P, and Fe) were significantly different among the three regions (p < 0.05). The correct discrimination rates of 25 peppers were 92.0% for LDA and 96.0% for OPLS-DA. The variable importance in the projection (VIP) values were ranged from 1.063 to 1.262 for seven elements (Tin, Fe, Zn, Y, Cr, Sr, and Mo) indicating that they played an important role for the geographical origin traceability of pepper. To sum up, multi-element concentrations together with chemometric data-processing can be promising for the geographical origin differentiation of pepper.

Multielemental Analysis Associated with Chemometric Techniques for Geographical Origin Discrimination of Tea Leaves (Camelia sinensis) in Guizhou Province, SW China.

This study aimed to construct objective and accurate geographical discriminant models for tea leaves based on multielement concentrations in combination with chemometrics tools. Forty mineral elements in 87 tea samples from three growing regions in Guizhou Province (China), namely Meitan and Fenggang (MTFG), Anshun (AS) and Leishan (LS) were analyzed. Chemometrics evaluations were conducted using a one-way analysis of variance (ANOVA), principal component analysis (PCA), linear discriminant analysis (LDA), and orthogonal partial least squares discriminant analysis (OPLS-DA). The results showed that the concentrations of the 28 elements were significantly different among the three regions (p < 0.05). The correct classification rates for the 87 tea samples were 98.9% for LDA and 100% for OPLS-DA. The variable importance in the projection (VIP) values ranged between 1.01⁻1.73 for 11 elements (Sb, Pb, K, As, S, Bi, U, P, Ca, Na, and Cr), which can be used as important indicators for geographical origin identification of tea samples. In conclusion, multielement analysis coupled with chemometrics can be useful for geographical origin identification of tea leaves.

Risk assessment for potentially toxic metal(loid)s in potatoes in the indigenous zinc smelting area of northwestern Guizhou Province, China.

We investigated potentially toxic metal (loid)s (arsenic, As; cadmium, Cd; chromium, Cr; copper, Cu; mercury, Hg; lead, Pb; selenium, Se; and zinc, Zn) in agricultural samples (i.e., Solanum tuberosum L. tubers (potatoes) and their planting media) in the indigenous zinc smelting area of northwestern Guizhou Province, China. Based on the pollution index values for As, Cd, Pb and Zn, the order of the samples was as follow: slag > planting soil with slag > planting soil without slag, and the order of the samples in terms of the bioconcentration factor was the opposite. Cr, Cu and Hg were present in the planting soil with and without slag at slight pollution levels, and the other potentially toxic metal (loid)s had different degrees of contamination. Additionally, the potentially toxic metal (loid) contents in potato were under their limit values except for Cd (all samples) and Pb and Se (some samples). All bioconcentration factors for potatoes were below 0.5, and no health risk index value for potatoes was higher than 0.1. Therefore, although no significant health risk associated with potentially toxic metal (loid)s via consuming potato exists for either adult men or women in the research area, the Cd concentration in this crop should be monitored.

Accumulation of Heavy Metals in Tea Leaves and Potential Health Risk Assessment: A Case Study from Puan County, Guizhou Province, China.

This study features a survey of the concentrations of aluminum (Al) and heavy metals (Mn, Pb, Cd, Hg, As, Cr, Ni, Cu, and Zn) in tea leaves and the corresponding cultivation soils (0-30 cm), carried out in Puan County (Guizhou Province, China). The average concentrations of Al, Mn, Pb, Cd, Hg, As, Cr, Ni, Cu, and Zn in the soil were 106 × 10³, 214, 20.9, 0.09, 0.12, 17.5, 121, 27.8, 131.2, and 64 mg·kg-1, respectively. The heavy metals' pollution indexes in the soil can be ranked as follows: Cu > Cr > Hg > As > Ni > Zn > Pb > Mn > Cd. The soil was moderately polluted by Cu because of the high geochemical background value of Cu in the area. The potential environment risk index (RI) showed that 7.69% out of the total sample sites were within the moderate level. Moreover, the ranges of Al, Mn, Pb, Cd, Hg, As, Cr, Ni, Cu, and Zn concentrations in young tea leaves were 250-660, 194-1130, 0.107-0.400, 0.012-0.092, 0.014-0.085, 0.073-0.456, 0.33-1.26, 6.33-14.90, 14.90-26.10, and 35.8-50.3 mg·kg-1, respectively. While in mature tea leaves, they were 4300-10,400, 536-4610, 0.560-1.265, 0.040-0.087, 0.043-0.089, 0.189-0.453, 0.69-2.91, 3.43-14.20, 6.17-16.25, and 9.1-20.0 mg·kg-1, respectively. Furthermore, the concentrations of Pb, Cu, As, Hg, Cd, and Cr in young tea leaves and mature tea leaves were all lower than the standard limit values (5.0, 30, 2.0, 0.3, 1.0, and 5.0 mg·kg-1 for Pb, Cu, As, Hg, Cd, and Cr, respectively) in China. Besides, the accumulation ability of tea leaves to Mn was the strongest, and the average bioconcentration factor (BCF) of Mn in mature tea leaves was 12.5. In addition, the average target hazard quotients (THQ) were all less than one for the young tea leaves and the average aggregate risk hazard index (HI) to adults was 0.272, indicating that there was not a potential health risk for adults through the consumption of the infusions brewed by young tea leaves. However, for mature tea leaves, the percentage which HI values were above one was 38.46%, and the risk to adults via the consumption of mature tea infusions were mainly contributed by Mn and Al.

Distribution and transfer of potentially toxic metal(loid)s in Juncus effusus from the indigenous zinc smelting area, northwest region of Guizhou Province, China.

We collected samples (i.e., the aerial parts and roots of Juncus effusus and their growth media) in the indigenous zinc smelting area in the northwest region of Guizhou Province, China, and we measured and analyzed potentially toxic metal(loid)s (arsenic, As; cadmium, Cd; chromium, Cr; copper, Cu; mercury, Hg; lead, Pb and zinc, Zn) in these samples. The results include the following: First, there is a high concentration of one or more potentially toxic metal(loid)s in the slag and surrounding soil in the research area. This situation might be caused by metal(loid) damage or contamination due to the circumstances. Additionally, Juncus effusus in the indigenous zinc smelting area are contaminated by some potentially toxic metal(loid)s; since they are used for Chinese medical materials, it is especially significant that their As, Cd and Pb concentrations are greater than their limited standard values. Finally, both the bioconcentration factors and transfer factors for most potentially toxic metal(loid)s in Juncus effusus are less than 1 in the study area. Therefore, we suggest that Juncus effusus could be used for phytostabilization or as a pioneer plant for phytoremediation of potentially toxic metal(loid)s because it has a tolerance and exclusion mechanism for these metal(loid)s in the research district.

Arabidopsis EDT1/HDG11 improves drought and salt tolerance in cotton and poplar and increases cotton yield in the field.

Drought and salinity are two major environmental factors limiting crop production worldwide. Improvement of drought and salt tolerance of crops with transgenic approach is an effective strategy to meet the demand of the ever-growing world population. Arabidopsis ENHANCED DROUGHT TOLERANCE1/HOMEODOMAIN GLABROUS11 (AtEDT1/HDG11), a homeodomain-START transcription factor, has been demonstrated to significantly improve drought tolerance in Arabidopsis, tobacco, tall fescue and rice. Here we report that AtHDG11 also confers drought and salt tolerance in upland cotton (Gossypium hirsutum) and woody plant poplar (Populus tomentosa Carr.). Our results showed that both the transgenic cotton and poplar exhibited significantly enhanced tolerance to drought and salt stress with well-developed root system. In the leaves of the transgenic cotton plants, proline content, soluble sugar content and activities of reactive oxygen species-scavenging enzymes were significantly increased after drought and salt stress compared with wild type. Leaf stomatal density was significantly reduced, whereas stomatal and leaf epidermal cell size were significantly increased in both the transgenic cotton and poplar plants. More importantly, the transgenic cotton showed significantly improved drought tolerance and better agronomic performance with higher cotton yield in the field both under normal and drought conditions. These results demonstrate that AtHDG11 is not only a promising candidate for crops improvement but also for woody plants.